- Probe CUST_10123_PI390587928
- Source Contig U35_45042
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_10123_PI390587928 | Hv_44K_v2 | CCCAACTGCACAAGTGTTTCGGCTGTGAAGTCATCGTTTTTGTAATTTTATCATCAAGTG | 0 | GeneList: royalblue MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 5.454 | 4.993 | 1.313 | 0.844 | 0.259 | 0.501 |
| Raw | 1927.377 | 2978.917 | 634.062 | 705.723 | 67.160 | 147.546 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest21 | ABC43416 | 250 | 3e-25 | 1 - 60 | 100 | 60 / 60 | minus | ABC43416 |
| Harvest35 | U35_45042 | 250 | 3e-25 | 1 - 60 | 100 | 60 / 60 | minus |
Contig Sequence (250 bp)
>U35_45042 250 Hv_44K_v2 CACTTGATGATAAAATTACAAAAACGATGACTTCACAGCCGAAACACTTGTGCAGTTGGG ACATTTAGGTACAGCCGGACTGACATACATCAACACTCGCCATATCGACCAACTTCACCA TTTCCAAAAAACGTTGGACCCGTACTTGAACTTCTCCTTCCCCTCGCACTCGATCTCAAG GTCTTTTGGGATGAACGGGACTATCTTCTGCTTGGCGAGGTCCTGGCGGCCGGGGAAGTT GTAAGGGAAC
Homology of Contig U35_45042 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |