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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_10017_PI390587928Hv_44K_v2TACGTGTAAATTATCAAGGGCAGAAGAAACATGACCGTTCTGATTTCTGATGGGAAAAAA592GeneList: royalblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 6.0985.6271.3150.6750.2260.344
Raw 3747.7605833.8691087.541943.801103.641173.288



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_57061.212119e-221012 - 106610055 / 55plus ABC00168 ABC00820 ABC50309
JLOC1JLOC1_36933.116395e-221241 - 129510055 / 55plus
Harvest21ABC503092372e-2228 - 8210055 / 55minusABC50309
Harvest21ABC0082014372e-221120 - 117410055 / 55plusABC00820
Harvest35U35_366506543e-25593 - 65210060 / 60plus
Harvest35U35_393165682e-2263 - 11710055 / 55minus
Harvest35U35_34114372e-221120 - 117410055 / 55plus



Contig Sequence (654 bp)

>U35_36650 654 Hv_44K_v2
GCTTGACGGCAACACCCTCAACTACTTCGGCAACAGCATCCCTATCAACCTGATCCTCGC
CGTCGTCGCCGAGGTCGTCCTCGTCGGAGGCGCCGAGTACTACAGGATCACCAACGGACT
GGTCAGTACCCTGAAGTAGATGTGCGTTACGGCAGCCAGGCGTACGTCCTTGTACTGACC
AACGGTTTCGTCAACTTCTCCGGCAGGAATTCGATGACAAGCTCCACCCAGGCGGCCCGT
TCGACCCGCTCGGCCTCGCCACCGACCCCGACCAGGCGGCGCTGCTCAAGGTGAAGGAGA
TCAAGAACGGACGGCTGGCCATGTTCTCCATGCTGGGCTTCTTCATCCAGGCCTACGTCA
CCGGCGAGGGGCCCTTCGAGAACCTGTGCGCCCACCTCAGCGACCCCTTCGGCAACAACC
TGCTCACCGTCATCTCCGGCGCCGCCGAGAGGGTGCCCAGCCTGTGAGCTGGCCGTTGAT
TGCCCGTCCGCCGCCGTCGGCTGTTGATGCTCAGCTGCATGCGTGCGTGCGATGCAGCAT
GATGTGCTGTGTGAATTTTACCGGGGAAAAGTATGAGAGTACGAATGTGCCGTACGTGTA
AATTATCAAGGGCAGAAGAAACATGACCGTTCTGATTTCTGATGGGAAAAAAAA



Homology of Contig U35_36650 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None