- Gene BART1_0-u20322
- Gene IDBART1_0-u20322
- Location chr3H: 230453682 - 230459653
Barley RTD
Matching HORVU genes
BarleyRTD transcripts were compared to the location of the IBSC 2017 Predicted Transcripts. Overlapping status is classified as Containing (HORVU is smaller than the BART), Contained (BART is smaller than the HORVU), Partial-Overlap (Overlap exists), and Undefined (the BART transcript has no overlapping HORVU).| HORVU ID | Percentage overlap | BART Gene Direction | HORVU Gene Direction | Overlap Length | Gene Length Difference | Overlapping Status |
|---|---|---|---|---|---|---|
| HORVU3Hr1G039100 | 97.4 | + | + | 5815 | -157 | Containing |
Transcripts from Gene BART1_0-u20322
| Transcript | Length(bp) | Description |
|---|---|---|
| BART1_0-u20322.001 | 3010 | 3010 bp MSTRG.20322.1 MSTRG.20322 |
| BART1_0-u20322.002 | 2831 | 2831 bp MSTRG.20322.2 MSTRG.20322 |
| BART1_0-u20322.003 | 2819 | 2819 bp MSTRG.20322.3 MSTRG.20322 |
| BART1_0-u20322.004 | 2833 | 2833 bp MSTRG.20322.4 MSTRG.20322 |
| BART1_0-u20322.005 | 3064 | 3064 bp MSTRG.20322.5 MSTRG.20322 |
| BART1_0-u20322.006 | 2833 | 2833 bp MSTRG.20322.6 MSTRG.20322 |
| BART1_0-u20322.007 | 2410 | 2410 bp MSTRG.20322.7 MSTRG.20322 |
| BART1_0-u20322.008 | 2958 | 2958 bp MSTRG.20322.8 MSTRG.20322 |
| BART1_0-u20322.009 | 2917 | 2917 bp MSTRG.20322.9 MSTRG.20322 |
| BART1_0-u20322.010 | 2969 | 2969 bp MSTRG.20322.10 MSTRG.20322 |
| BART1_0-u20322.011 | 2783 | 2783 bp MSTRG.20322.11 MSTRG.20322 |
| BART1_0-u20322.012 | 2967 | 2967 bp MSTRG.20322.12 MSTRG.20322 |
| BART1_0-u20322.013 | 2757 | 2757 bp MSTRG.20322.13 MSTRG.20322 |
| BART1_0-u20322.014 | 2986 | 2986 bp MSTRG.20322.14 MSTRG.20322 |
| BART1_0-u20322.015 | 2786 | 2786 bp MSTRG.20322.15 MSTRG.20322 |
| BART1_0-u20322.016 | 2965 | 2965 bp MSTRG.20322.16 MSTRG.20322 |
| BART1_0-u20322.017 | 3082 | 3082 bp MSTRG.20322.17 MSTRG.20322 |
| BART1_0-u20322.018 | 2729 | 2729 bp MSTRG.20322.18 MSTRG.20322 |
| BART1_0-u20322.019 | 2667 | 2667 bp MSTRG.20322.19 MSTRG.20322 |
| BART1_0-u20322.020 | 2851 | 2851 bp MSTRG.20322.20 MSTRG.20322 |
| BART1_0-u20322.021 | 2885 | 2885 bp MSTRG.20322.21 MSTRG.20322 |
| BART1_0-u20322.022 | 2759 | 2759 bp MSTRG.20322.22 MSTRG.20322 |
| BART1_0-u20322.023 | 2643 | 2643 bp MSTRG.20322.23 MSTRG.20322 |
| BART1_0-u20322.024 | 2761 | 2761 bp MSTRG.20322.24 MSTRG.20322 |
| BART1_0-u20322.025 | 2728 | 2728 bp MSTRG.20322.25 MSTRG.20322 |
| BART1_0-u20322.026 | 2948 | 2948 bp MSTRG.20322.26 MSTRG.20322 |
| BART1_0-u20322.027 | 2974 | 2974 bp MSTRG.20322.27 MSTRG.20322 |
| BART1_0-u20322.028 | 2970 | 2970 bp MSTRG.20322.28 MSTRG.20322 |
| BART1_0-u20322.029 | 2774 | 2774 bp MSTRG.20322.29 MSTRG.20322 |
| BART1_0-u20322.030 | 3151 | 3151 bp MSTRG.20322.30 MSTRG.20322 |
| BART1_0-u20322.031 | 3070 | 3070 bp MSTRG.20322.31 MSTRG.20322 |
| BART1_0-u20322.032 | 2868 | 2868 bp MSTRG.20322.32 MSTRG.20322 |
| BART1_0-u20322.033 | 2700 | 2700 bp MSTRG.20322.33 MSTRG.20322 |
| BART1_0-u20322.034 | 2945 | 2945 bp MSTRG.20322.34 MSTRG.20322 |
| BART1_0-u20322.035 | 2689 | 2689 bp MSTRG.20322.35 MSTRG.20322 |
| BART1_0-u20322.036 | 3043 | 3043 bp MSTRG.20322.36 MSTRG.20322 |
| BART1_0-u20322.037 | 2756 | 2756 bp MSTRG.20322.37 MSTRG.20322 |
| BART1_0-u20322.038 | 2901 | 2901 bp MSTRG.20322.38 MSTRG.20322 |
| BART1_0-u20322.039 | 2713 | 2713 bp MSTRG.20322.39 MSTRG.20322 |
| BART1_0-u20322.040 | 2976 | 2976 bp MSTRG.20322.40 MSTRG.20322 |
| BART1_0-u20322.041 | 3045 | 3045 bp MSTRG.20322.41 MSTRG.20322 |
| BART1_0-u20322.042 | 3003 | 3003 bp MSTRG.20322.42 MSTRG.20322 |
| BART1_0-u20322.043 | 3019 | 3019 bp MSTRG.20322.43 MSTRG.20322 |
| BART1_0-u20322.044 | 2887 | 2887 bp MSTRG.20322.44 MSTRG.20322 |
| BART1_0-u20322.045 | 2852 | 2852 bp MSTRG.20322.45 MSTRG.20322 |
| BART1_0-u20322.046 | 2442 | 2442 bp MSTRG.20322.46 MSTRG.20322 |
| BART1_0-u20322.047 | 3075 | 3075 bp MSTRG.20322.47 MSTRG.20322 |
| BART1_0-u20322.048 | 2824 | 2824 bp MSTRG.20322.48 MSTRG.20322 |
| BART1_0-u20322.049 | 3017 | 3017 bp MSTRG.20322.49 MSTRG.20322 |
| BART1_0-u20322.050 | 2656 | 2656 bp MSTRG.20322.50 MSTRG.20322 |
| BART1_0-u20322.051 | 2828 | 2828 bp MSTRG.20322.51 MSTRG.20322 |
| BART1_0-u20322.052 | 3158 | 3158 bp MSTRG.20322.52 MSTRG.20322 |
| BART1_0-u20322.053 | 3317 | 3317 bp MSTRG.20322.53 MSTRG.20322 |
| BART1_0-u20322.054 | 2887 | 2887 bp MSTRG.20322.54 MSTRG.20322 |
| BART1_0-u20322.055 | 3020 | 3020 bp MSTRG.20322.55 MSTRG.20322 |
| BART1_0-u20322.056 | 2623 | 2623 bp MSTRG.20322.56 MSTRG.20322 |
| BART1_0-u20322.057 | 2831 | 2831 bp MSTRG.20322.57 MSTRG.20322 |
| BART1_0-u20322.058 | 2354 | 2354 bp MSTRG.20322.58 MSTRG.20322 |
| BART1_0-u20322.059 | 2819 | 2819 bp MSTRG.20322.59 MSTRG.20322 |
| BART1_0-u20322.060 | 2687 | 2687 bp MSTRG.20322.60 MSTRG.20322 |
| BART1_0-u20322.061 | 2988 | 2988 bp MSTRG.20322.61 MSTRG.20322 |
| BART1_0-u20322.062 | 2382 | 2382 bp MSTRG.20322.62 MSTRG.20322 |
| BART1_0-u20322.063 | 2653 | 2653 bp MSTRG.20322.63 MSTRG.20322 |
| BART1_0-u20322.064 | 2634 | 2634 bp MSTRG.20322.64 MSTRG.20322 |
| BART1_0-u20322.065 | 2836 | 2836 bp MSTRG.20322.65 MSTRG.20322 |
| BART1_0-u20322.066 | 3700 | 3700 bp MSTRG.20322.66 MSTRG.20322 |
| BART1_0-u20322.067 | 3016 | 3016 bp MSTRG.20322.67 MSTRG.20322 |
| BART1_0-u20322.068 | 2998 | 2998 bp MSTRG.20322.68 MSTRG.20322 |
| BART1_0-u20322.069 | 3074 | 3074 bp MSTRG.20322.69 MSTRG.20322 |
| BART1_0-u20322.070 | 2826 | 2826 bp MSTRG.20322.70 MSTRG.20322 |
| BART1_0-u20322.071 | 2912 | 2912 bp MSTRG.20322.71 MSTRG.20322 |
| BART1_0-u20322.072 | 2710 | 2710 bp MSTRG.20322.72 MSTRG.20322 |
| BART1_0-u20322.073 | 2752 | 2752 bp MSTRG.20322.73 MSTRG.20322 |
| BART1_0-u20322.074 | 2917 | 2917 bp MSTRG.20322.74 MSTRG.20322 |
| BART1_0-u20322.075 | 3171 | 3171 bp MSTRG.20322.75 MSTRG.20322 |
| BART1_0-u20322.076 | 3193 | 3193 bp MSTRG.20322.76 MSTRG.20322 |
| BART1_0-u20322.077 | 2863 | 2863 bp MSTRG.20322.77 MSTRG.20322 |
| BART1_0-u20322.078 | 2897 | 2897 bp MSTRG.20322.78 MSTRG.20322 |
| BART1_0-u20322.079 | 2785 | 2785 bp MSTRG.20322.79 MSTRG.20322 |
| BART1_0-u20322.080 | 3429 | 3429 bp MSTRG.20322.80 MSTRG.20322 |
| BART1_0-u20322.081 | 2954 | 2954 bp MSTRG.20322.81 MSTRG.20322 |
| BART1_0-u20322.082 | 3064 | 3064 bp MSTRG.20322.82 MSTRG.20322 |
| BART1_0-u20322.083 | 2892 | 2892 bp MSTRG.20322.83 MSTRG.20322 |
| BART1_0-u20322.084 | 3750 | 3750 bp MSTRG.20322.84 MSTRG.20322 |
| BART1_0-u20322.085 | 2670 | 2670 bp MSTRG.20322.85 MSTRG.20322 |
| BART1_0-u20322.086 | 2283 | 2283 bp MSTRG.20322.86 MSTRG.20322 |
| BART1_0-u20322.087 | 2805 | 2805 bp MSTRG.20322.87 MSTRG.20322 |
| BART1_0-u20322.088 | 2710 | 2710 bp MSTRG.20322.88 MSTRG.20322 |
| BART1_0-u20322.089 | 2798 | 2798 bp MSTRG.20322.89 MSTRG.20322 |
| BART1_0-u20322.090 | 2650 | 2650 bp MSTRG.20322.90 MSTRG.20322 |
| BART1_0-u20322.091 | 2695 | 2695 bp MSTRG.20322.91 MSTRG.20322 |
| BART1_0-u20322.092 | 2853 | 2853 bp MSTRG.20322.92 MSTRG.20322 |
| BART1_0-u20322.093 | 2842 | 2842 bp MSTRG.20322.93 MSTRG.20322 |
| BART1_0-u20322.094 | 2861 | 2861 bp MSTRG.20322.94 MSTRG.20322 |
| BART1_0-u20322.095 | 2349 | 2349 bp MSTRG.20322.95 MSTRG.20322 |
| BART1_0-u20322.096 | 2840 | 2840 bp MSTRG.20322.96 MSTRG.20322 |
| BART1_0-u20322.097 | 3138 | 3138 bp MSTRG.20322.97 MSTRG.20322 |
| BART1_0-u20322.098 | 2493 | 2493 bp MSTRG.20322.98 MSTRG.20322 |
| BART1_0-u20322.099 | 2389 | 2389 bp MSTRG.20322.99 MSTRG.20322 |
| BART1_0-u20322.100 | 2412 | 2412 bp MSTRG.20322.100 MSTRG.20322 |
| BART1_0-u20322.101 | 2987 | 2987 bp MSTRG.20322.101 MSTRG.20322 |
| BART1_0-u20322.102 | 3110 | 3110 bp MSTRG.20322.102 MSTRG.20322 |
| BART1_0-u20322.103 | 2642 | 2642 bp MSTRG.20322.103 MSTRG.20322 |
| BART1_0-u20322.104 | 2737 | 2737 bp MSTRG.20322.104 MSTRG.20322 |
| BART1_0-u20322.105 | 2707 | 2707 bp MSTRG.20322.105 MSTRG.20322 |
| BART1_0-u20322.106 | 2593 | 2593 bp MSTRG.20322.106 MSTRG.20322 |
| BART1_0-u20322.107 | 2671 | 2671 bp MSTRG.20322.107 MSTRG.20322 |
| BART1_0-u20322.108 | 2661 | 2661 bp MSTRG.20322.108 MSTRG.20322 |
| BART1_0-u20322.109 | 2618 | 2618 bp MSTRG.20322.109 MSTRG.20322 |
| BART1_0-u20322.110 | 2652 | 2652 bp MSTRG.20322.110 MSTRG.20322 |
| BART1_0-u20322.111 | 2866 | 2866 bp MSTRG.20322.111 MSTRG.20322 |
| BART1_0-u20322.112 | 2633 | 2633 bp MSTRG.20322.112 MSTRG.20322 |
| BART1_0-u20322.113 | 2574 | 2574 bp MSTRG.20322.113 MSTRG.20322 |
| BART1_0-u20322.114 | 2900 | 2900 bp MSTRG.20322.114 MSTRG.20322 |
| BART1_0-u20322.115 | 2869 | 2869 bp MSTRG.20322.115 MSTRG.20322 |
| BART1_0-u20322.116 | 2683 | 2683 bp MSTRG.20322.116 MSTRG.20322 |
| BART1_0-u20322.117 | 2595 | 2595 bp MSTRG.20322.117 MSTRG.20322 |
| BART1_0-u20322.118 | 2717 | 2717 bp MSTRG.20322.118 MSTRG.20322 |
| BART1_0-u20322.119 | 2958 | 2958 bp MSTRG.20322.119 MSTRG.20322 |
| BART1_0-u20322.120 | 2734 | 2734 bp MSTRG.20322.120 MSTRG.20322 |
| BART1_0-u20322.121 | 2849 | 2849 bp MSTRG.20322.121 MSTRG.20322 |
| BART1_0-u20322.122 | 2934 | 2934 bp MSTRG.20322.122 MSTRG.20322 |
| BART1_0-u20322.123 | 2848 | 2848 bp MSTRG.20322.123 MSTRG.20322 |
| BART1_0-u20322.124 | 2765 | 2765 bp MSTRG.20322.124 MSTRG.20322 |
| BART1_0-u20322.125 | 2817 | 2817 bp MSTRG.20322.125 MSTRG.20322 |
| BART1_0-u20322.126 | 2622 | 2622 bp MSTRG.20322.126 MSTRG.20322 |
| BART1_0-u20322.127 | 3015 | 3015 bp MSTRG.20322.127 MSTRG.20322 |
| BART1_0-u20322.128 | 3274 | 3274 bp MSTRG.20322.128 MSTRG.20322 |
| BART1_0-u20322.129 | 2564 | 2564 bp MSTRG.20322.129 MSTRG.20322 |
| BART1_0-u20322.130 | 2599 | 2599 bp MSTRG.20322.130 MSTRG.20322 |
| BART1_0-u20322.131 | 2643 | 2643 bp MSTRG.20322.131 MSTRG.20322 |
| BART1_0-u20322.132 | 2656 | 2656 bp MSTRG.20322.132 MSTRG.20322 |
| BART1_0-u20322.133 | 2588 | 2588 bp MSTRG.20322.133 MSTRG.20322 |
| BART1_0-u20322.134 | 2760 | 2760 bp MSTRG.20322.134 MSTRG.20322 |
| BART1_0-u20322.135 | 2774 | 2774 bp MSTRG.20322.135 MSTRG.20322 |
| BART1_0-u20322.136 | 2594 | 2594 bp MSTRG.20322.136 MSTRG.20322 |
| BART1_0-u20322.137 | 3123 | 3123 bp MSTRG.20322.137 MSTRG.20322 |
| BART1_0-u20322.138 | 2789 | 2789 bp MSTRG.20322.138 MSTRG.20322 |
| BART1_0-u20322.139 | 2804 | 2804 bp MSTRG.20322.139 MSTRG.20322 |
| BART1_0-u20322.140 | 2598 | 2598 bp MSTRG.20322.140 MSTRG.20322 |
| BART1_0-u20322.141 | 2608 | 2608 bp MSTRG.20322.141 MSTRG.20322 |
| BART1_0-u20322.142 | 2505 | 2505 bp MSTRG.20322.142 MSTRG.20322 |
| BART1_0-u20322.143 | 1270 | 1270 bp MSTRG.20322.143 MSTRG.20322 |
| BART1_0-u20322.144 | 1866 | 1866 bp MSTRG.20322.144 MSTRG.20322 |
| BART1_0-u20322.145 | 955 | 955 bp MSTRG.20322.145 MSTRG.20322 |
Exon Structure of BART1_0-u20322
grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-30)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Rice PP7 | LOC_Os03g19480.1 | +1 | 1e-62 | 232 | 126/207 (61%) | protein|SET domain containing protein, expressed |
| TAIR PP10 | None | - | - | - | - | - |
| BRACH PP3 | Bradi1g64460.4.p | +1 | 2e-72 | 258 | 137/211 (65%) | pacid=32796250 transcript=Bradi1g64460.4 locus=Bradi1g64460 ID=Bradi1g64460.4.v3.1 annot-version=v3.1 |
GO Annotation
Generated by PANNZER| GO ID | GO terms |
|---|---|
| GO:0006349 | regulation of gene expression by genetic imprinting |
| GO:0034968 | histone lysine methylation |
| GO:0009506 | plasmodesma |
| GO:0009737 | response to abscisic acid |
| GO:0048587 | regulation of short-day photoperiodism, flowering |
| GO:0031519 | PcG protein complex |
| GO:0003727 | single-stranded RNA binding |
| GO:1900055 | regulation of leaf senescence |
| GO:0018024 | histone-lysine N-methyltransferase activity |
| GO:0006342 | chromatin silencing |
| GO:0005677 | chromatin silencing complex |
Barley PseudoMolecules GBrowse
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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons