Matching HORVU genes

BarleyRTD transcripts were compared to the location of the IBSC 2017 Predicted Transcripts. Overlapping status is classified as Containing (HORVU is smaller than the BART), Contained (BART is smaller than the HORVU), Partial-Overlap (Overlap exists), and Undefined (the BART transcript has no overlapping HORVU).

HORVU IDPercentage overlapBART Gene DirectionHORVU Gene DirectionOverlap LengthGene Length DifferenceOverlapping Status
HORVU2Hr1G03605097.0--10844735Partial-Overlap




Transcripts from Gene BART1_0-u09734

TranscriptLength(bp)Description
BART1_0-u09734.001727727 bp MSTRG.9734.1 MSTRG.9734
BART1_0-u09734.002732732 bp MSTRG.9734.2 MSTRG.9734
BART1_0-u09734.003596596 bp MSTRG.9734.3 MSTRG.9734



Exon Structure of BART1_0-u09734


grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons



Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-30)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP7None-----
TAIR PP10None-----
BRACH PP3None-----




GO Annotation

There is no GO annotation for this gene




Barley PseudoMolecules GBrowse

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grey: non-coding, green: Barley Morex IBSC 2017 Transcript CDS, red: Barley RTD exons