Microarray Probes on PGSC0003DMT400067834
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_33730_PI426222305 |
JHI_St_60k_v1 |
GCTTGGAGTGCTAGGTTTTGCCTAAGGAACATGCTCTGATATTAAATTGTAAAGAGAAAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400067834
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400067834 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G25390.1 |
+1 |
7e-138 |
435 |
211/314 (67%) |
Protein kinase superfamily protein | chr1:8906640-8908800 REVERSE LENGTH=629 |
Transcript Sequence (3472 bp)
>PGSC0003DMT400067834 3472 pgsc_dm_v3.4
CTCAGATTCTCACCATCTTCCAAATTCCCTGTCAACAATAAATATACAGATATGAATCTA
CAGACTACAAATAATTCCAGATATGACTCTCACTCACTCATTCTCTTTTCGTATTCCAAA
TGACTCTCTCCTACCCTTCCACCACTACCAATGGCCGCCGCGGCGCCACCACCACAACTA
CTCTCTTCTTCGCCACCTTTATTCTCACAACATCCTTCTCCTTCTCCTTCTCTGATGACA
ACGTCTTATTCCCCAATTGTCATCTCACTTTCTCCTGTGGTTCCATCCGTAACATCACCT
ACCCATTCACCGGCGGCGATCGCCCTAACTACTGTGGCCTCCCGGATTTCAAACTCCGAT
GTGTTGACGACAAACACACCGAGTTTACTCACCAATCACTTACTTACCGTGTTCTTTCTA
TTAATCAGTCATCAACGACCATGACTGTATCGAGAATCGACCTCTGGAAAAATTCCTGCC
CTTCGCAATTCATCAACACTACTTTTAATTCTTCTCTTTTCAACATTGACCGTAACGAAG
ACGAAGAACTTTCGTTGAGCTACGGCTGCGATGTCTCTGCATTGGTTATCACGCCTCAGA
ATTTGTTCAACTGTAGTGTAGATGGTTTGAATTTCACCGGCGCATTTTACTTACTAGGTC
CAATTCCAAGTGACCCTTTTCTGAATGTCATAACTTGTACAACTATGGTCACTGTTCCGA
TGTTTAGAACAGTGGGTAAAATGCTATATAGCAATGAGATTACTCTTGGGGAGGCATTGA
TGCAGGGGTTTAGTGTGAAATATGATACCCCTTATGATAGGCGCTGTTCTGAGTGCAAGA
GTCTGGGTGTGAATTGCGGATTTATTGTGGGGTTGTCTCAGCTAATTTGTATTTGTGGAG
AAATGCCTTGTACATTTCTTCGAGAACATTCTCATGAAAGTTCCTCACAAGGTACTGACA
ACTGAGAACTTTATCCTTTAATTTTACTACTAATCAGGAGTTCTTATTATTAAACATAGA
AATCTATAGTTTGAAATTCAGGACTGAATGGATTTAGCTTAACAGTAACCCAGTTAGAGA
ATCGGTACATATAGGTGTCGATTGTTCTAGTTGATGAATCCTGAGTTCATGGTCTATGAC
ATTGTTTGTTCTACTCCAACATGATTACATTGCGGTTGATTGGTATATGTGTAGTGTATC
CCGTGTAATCTTACAAGTGTGGTCTAGGAAGGGTGGTGTGTGCGCAGTCTTCGCCCTACC
TTGTGAAGATAGAGAGGTTGTTTCCAATTATAATTTCATGCTTTTGCATTTATATTTGTT
ATGACTGTATGAGTAGTTGTTATCTTATAGCACCTATTATATAGGTCTTTGATTAAGGGA
TACCTAAAAAACACTATGCGACTTGCTAACACAAAAGTGAACTTGAAACGAAGCGTAATC
CAATATGATTTACTAGAATCTTCATGTTAGTTTTTAGATTTCCATGGTATGTTCTCTTCA
GGTATCCCTAGGAATTCTTGTTACAGTATGCTTCTTTCTTATAGTTTATACTTCTCAGAT
CTATTATTAGCGAATACACCCATTTCGCCACATGAGTTTTGTTTGTTTCTCCTAATTCCA
GCCGGATATACCTTATGTTTACCTGAGCATCAATTGTAGTTACCACTTAATTGACGACAT
TATGACTGTTTTGCAGATAACCGAAAGAAAAATCAGATGCCACTTGCAGTAGGCATTAGT
GTAGGAGGTGCTGTACTTGCCAGCATTGGTGTTGGGTGGCTAGTCTTCTTCTGCAGACAA
AAGAGAAAGCGGATTGCATCACAGGCTTCACTTGCCCAAACCGAAAGGAAGGATCTTCCA
ATTTTAAGTTCAAGCAACGGCCTGAGTTCCTCTTCTACTCCTTCTTCAACCACTTTCACC
AGAAGCATTCCCTCTTATCCCTCTTCCAAATCTGAAGCTGATTACGGGAGGGGAAGCTCC
TACTTTGGGGCTCATGTCTTCAGTTTTGCTGAACTTGAAGAAGCCACGAATAATTTTGAT
CCATCTAAAGAACTTGGGGATGGTGGTTTTGGTGTCGTGTACTATGGCAAACTCCATGAT
GGTCGCGTGGTTGCAGTCAAGCGCTTGTATGAGAACAATTTCAAGCGTGTGGAGCAGTTC
ATGAATGAAGTAGAGATTTTAACTCAGCTCCGCCACAAGAACCTAGTGATGTTGTATGGG
TGTACATCTAAACGAAGCCGAGAGTTACTGCTTGTTTATGAGTATATACCAAACGGGACT
GTGGCAGATCATCTGCATGGTAAACGGGCCAAATCTGGCTTACTCTCTTGGCCTATCCGA
ATGAACATAGCCATTGAGACTGCTGAAGCTCTGGCTTATCTCCACTCCTCAGTTATAATA
CACCGTGACGTCAAAACCAACAACATTCTGTTAGACAATGATTTCCATGTGAAAGTTGCT
GATTTTGGGCTATCAAGACTGTTCCCAACTAATGTCACACATGTCTCTACTGCTCCACAG
GGTACACCAGGCTACGTTGATCCTGAATACTACCAATGTTACCAGCTCACTGAAAAGAGT
GATGTCTATAGTTTTGGGGTGGTCTTGGTAGAGCTGATCTCATCATTAGAAGCTGTGGAT
ACCAACAGGCACCGCCATGATATTAATTTGTCTAATATGGCTGTCAACAAGATCCAAGGC
CATTCAATACATGAGTTAGTTGATCCAAGTCTTGGATTCTCAACAAACAGCTCCGTGAGG
AGGATGACTACATTAGTCGCTGAGTTAGCTTTCCGATGTCTGCAACAAGAGAGAGATCTG
AGACCTTCAATGCAAGAAGTGCTGGAGACATTGAGAGGCATCCAGAATGGAGAGTCGAAA
GCACACAATGCTGAGGTACTGGATATTGTGGTAGATGATGTTGGGCTCCTAAAGGAGGGC
CCCTTTTCTTCTCCAGATTCAGTTGCCGCTGACAAATGAGTTGACAGCTCCACACCACAT
TCTAGTGGATGAAATATCTTTATCAGGTTGGTTGAATTCAATGCTAGGTGTGGAAGCAAC
TACTATTTTGGCACTTGTGATCAGTGTCATGTTTGGGCTAGTATCTCGCGTCTTCCATAG
ATAATTAATTTCTTATTTTTGCTTACATATAGTTATCTTGTTATCGTCAATATTTTCTGT
GGGAGATTATCTAAAACTGCTTTTCGCGTAAGGCAATGTATATAAATAGTGAATAGGGCT
GCCAACATTCTAGTATACATATGCATCTTTTGCTCTTTGTACATCAGGTTTTGTTTCTTT
ACCGACCTTATGGTCCTTCTGTTACCTTAAAGTTCATTTATGTTGAGGACATGAAAATCA
TATGTAACAACAATAATGCACTGCAGCAGAACATATTCTAAGCCTATTCGTAGCTTGGAG
TGCTAGGTTTTGCCTAAGGAACATGCTCTGATATTAAATTGTAAAGAGAAAA
